Sad to hear so much is damaged.
Think of a lightning strike as a series of
events instead of just one.
Things that were damaged in the first blow, might trigger secondair
events damaging more, and more. Putting power on or checking equipment in the damaged system can also cause more damage.
Like a
VHF is mostly well surge and reverse polarity protected from the power input side, that can not be said from putting more than 10Kvolt into the
antenna output side, which crosses the board an finds it way through every wire connected to the DC switchboard.
As said, switches that connect-disconnect both poles instead of just 1 are in the shorepower as distribution boards a way to cut any
current flowing from either side.
Also extra surgeprotectors at the different stages in the
electrical system can block (clamp) current flow of to high voltage.
As for repair:
Sadly one has to adapt to the view that any!! part of the
electrical system can be or is compromised.
Remember that two bare wires (molten isolation) not touching each other can carry a current and make equipment functioning ok. In case of one wire touching some metal leaking current away and you have RCD's installed you might hope they will trip. Otherwise not. You simply would't know something might be live.
Even an isolation test will show up perfect as long as the bare wires are separated by air.
So still there is a great
safety and fire hazard if wires will connect by pushing or vibrating.
Since wires and connectors are more often than not tucked away in the sometimes most unreachable places that might be compromised one has to rethink if a full rewire is the more safe or easy option.
But always communicate this problem and possible extra cost with your insurance. The cost of compromised wires might be more that some easy to replace equipment which always gets the first attention.
At least do a big visual
inspection in good light on every inch of wire, connector fuse, board, piece of equipment. Use your nose too!!
Detach equipment the fully from damaged system and wires and test functionality on a known, checked good system (not your boat)
And yes that means also your fridge. A separate 110-240 volt cable with transformer or DC powerbank makes this a bit more easy.
So wires, switches and connectors are a main safety concern. one has to undertake some real effort to check those.
Although not always conclusive still do an isolation test (megger) on all wires and connectors, switches etc.
Only if all tests are ok you might reconnect part by part the electrical components and retest them connected.
You might want to let an professional boat electrician do a final check and have him sign the "checked and OK" for the insurance later on.
Good luck man!!!