Here's what the Yanmar manual says about storage.
Quote:
If the engine will not be used for an extended
period of time, special measures should be
taken to protect the
cooling system, fuel
system and combustion chamber from
corrosion and the exterior from rusting.
The engine can normally stand idle for up to
6 months. If it remains unused for longer
than this, please contact your authorized
Yanmar
Marine dealer or distributor. HUH?
In cold temperatures or before long-term
storage, be sure to drain the seawater from
the cooling system.
WARNING! NEVER remove the coolant
filler cap if the engine is hot. Steam and
hot engine coolant will spray out and
seriously burn you. Allow the engine to
cool down before you attempt to remove
the cap. DUH!
CAUTION! DO NOT drain the coolant
system. A full coolant system will
prevent
corrosion and frost damage.
CAUTION! If seawater is left inside of the
engine, it may freeze and damage
parts
of the cooling system when the ambient
temperature is below 0°C (32°F).
PREPARE ENGINE FOR
LONG-TERM STORAGE
Note: If the engine is close to a periodic
maintenance interval, perform those
maintenance procedures before putting the
engine into long-term storage.
1. Wipe off any dust or oil from the outside
of engine.
2. Drain
water from fuel filters.
3. Drain
fuel tank completely or fill the tank
to prevent
condensation. (Small portable tanks)
4. Grease the exposed areas and joints of
the
remote control
cables and the
bearings of the
remote control handle.
5. Seal the intake silencer, exhaust pipe,
etc. to prevent moisture or
contamination from entering engine.
6. Completely drain
bilge in
hull bottom. N/A
7. Waterproof the engine room to prevent
rain or seawater from entering. N/A
8. Charge the
battery once a month to
compensate for battery’s selfdischarge. N/A
9. Remove key from key switch and cover
the key switch with moisture cap. N/A
Note: The drain cocks are opened before
shipping from the factory.
Marine gear
ZF25A does not have a drain cock on the
clutch cooler.
NOTICE: If seawater is left inside, it may
freeze and damage parts of the cooling
system (heat exchanger, seawater
pump, etc.) when ambient temperature
is below 32°F (0°C).
1. Open the seawater drain cock on the
clutch cooler (if equipped). Allow to
drain. Open the seawater drain cock on
the intercooler (4JH4-HTE only) and
drain. If no
water drains, use a stiff
brush to remove any debris.
2. Remove four bolts attaching the side
cover of the seawater
pump. Remove
the cover and drain the seawater.
3. Install cover and tighten bolts.
4. Close all the drain cocks.
RETURNING THE ENGINE
TO
SERVICE
1. Replace the oil and the
oil filter before
running the engine.
2. Supply fuel if the fuel in the fuel tank was
removed, and prime the fuel system.
3. Confirm that there is engine coolant in
the engine.
4. Operate the engine at idle speed for 1
minute.
5. Check fluid levels and check engine for
leaks. /Quote
For my winterizing procedure I remove the impeller from the
raw water pump.
I've also heard that one should remove the injectors and squirt
motor oil in and crank over a few turns. But I would think leaving the exhaust hose off and cranking the motor over every 3-6 months should be OK.